Hokie-
I must have started typing my post before yours was up.
We don't purposefully fail to cut sections where delegated connections exist. We don't go out of our way to cut one there, either. If that's where a section wants to be cut, we cut it there. If a section is cut where a delegated connection exists, we show a generic connection (typically double angles), but don't call anything out.
We provide a Beam Reaction Table that lists reactions for each beam depth. Sometimes, if there is one very large reaction for a particular beam depth, we will show that one on plan and eliminate from the schedule so that all beams of that depth aren't being designed for that reaction (i.e. say all but one W16 has a 30 K max reaction, but one has a 80 K reaction; I'll show 30 K in the schedule and 80 K on plan at the one particular location).
For moment connections, our typicals call for full-pen welds, so there is no design to do there. Occasionally, we'll have a fabricator ask for design moments so that they can design them and not use full-pen welds.
We've even, on recent jobs, delegated braced frame connections. What we've had happen is we go through the design and detailing of the gussets, welds, bolts and then the fabricator comes back and says, "You know what, we prefer to make our braced frame connections with double angles field bolting to the gusset instead of the field welding you show". That's a LOT of time and effort wasted for no reason.
I'd be interested to know how the guys that design and document connections deal with those situations.