Paul - I have downloaded Cande now and will be having a look through it, but it's a complex program, and I don't have a lot of spare time at the moment, so it will take some time for me to become familiar with it. I'll post here if I find anything useful for your problem, but don't hold your breath! But thanks for drawing my attention to this program, it should be useful as a cross check to output from my other programs.
The main program I use is Strand7. The latest version has a module allowing easy modelling of a construction sequence, so you can place fill in layers. It's soil models are fairly basic, but if necessary I adjust soil properties at each step with an external spreadsheet through the Strand7 API. The latest version has a new Cam-Clay model, but I haven't tried using that for serious work yet. The other program I use is an in-house product of one of my clients, so is not available for general use.
The most popular FEA programs for soils applications (at least in Australia and Europe) seem to be FLAC and Plaxis. Both are well-suited to soil-structure interaction problems, but I prefer Strand7 because it includes everything within one package at a reasonable price (including 3D, dynamic analysis, buckling, thermal, etc), and with the API has the flexibility to do almost any task.
Doug Jenkins
Interactive Design Services