If there is/can be room for them I second what HCBFlash says, install different holders, and go with a 1-1/2" x 13/32" fuses. If there isn't enough room, then the GMC10 you've indicated will probably be a workable compromise.
I've never seen 5x20mm fuses in motor circuits (nor do I want to
With fan-based extruder barrel cooling keep in mind not to set PID temperature controller cooling cycle time below 20 seconds or so. A 20 second cycle time is 3 starts/minute when in cooling mode, and not "saturated" (that is, not calling for 100% cooling), or 180 starts/hour.
A fuse element grows and shrinks a little bit every time load is applied, current flows through it, and it gets hotter (then cooler, when current is turned off). Think of the effect as a greatly attenuated version of what happens when turning on and off an incandescent light bulb. It 'work hardens' the metal, and especially when operated in lower ambient temperatures this leads to a higher fuse mortality rate.
Motors are worse in this respect than resistive heating elements due to inrush current, but sometimes you can run into problems on the flip-side ... one case in point.
A couple of years back we installed a extruder control system replacement using 10x38mm semiconductor fusing for barrel heat zone protection, solid-state power blocks, and used an existing clean air duct system (untempered outside air) for cabinet cooling. Nothing we haven't done before, but as winter approached heater zone fuses started popping like, well, popcorn.
No identifiable grounding problems were found, fuse amp ratings were well suited to both load and power controllers, and fuse failures were happening on a number of different zones. I happened to be troubleshooting an unrelated problem one day, and noticed the system integrator had used a heating cycle time of 20 seconds.
Changing heat cycle time to 5 seconds cured the fuse blowing problem. Wild, eh?