Real quick to clarify. I know I'm stepping in half way through the conversation, but a clarification on what hydtools is trying to say in regards to tubing and piping needs to be expressed.
Piping should typically never be used for your type of application with low flow, low pressure and small diameter. Typically piping is used for large water and gas-line practices, but causes some inherent issues with vibration and temperature. Additionally, pipe threads cannot tolerate vibration, shock or thermal stresses. Even when piping is utilized, they will typically weld the ends to reduce leakage effects in low pressure locations of the system. The piping will also typically introduce large amounts of contamination into your system due to the processing of the pipe.
Tubing is your better choice becuase it can easily be bent, flared and is rather ductile. Typically, for your low pressure system, you will want to use a flared connection, such as JIC, where the flare sits at 37 degrees and is readily available. You could also use something more leak resistant like a swage, which can be bought from Swagelok. The swage utilizes a two piece ferrel set to help lock the connections together.
The main difference between tubing and piping when seeing them side by side is their diameter rating. Piping runs on an inside diameter rating, where as tubing runs on an outside diameter rating. With tubing you need to be aware of the thickness becuase this will effect the pressure rating the tubing can withstand, likewise with piping when applicable. If you are using low flow such as 3 GPM and relatively low pressure, I'm not sure why -04 or -06 tubing can not be used, maybe -08 if there are a lot of resistive locations within your system.
Typically when sizing your tubing you want to have a target fluid velocity of around 7-20 ft/s on the pressure side. I'm not going to do the calculations for you, but I have faith you can calculate it out. This will ensure are general turbulent system, which will reduce other negative effects within your system.
Being that I am a big advocate of contamination cleanliness and you're working with underground operatino next to the dirt. Have you considered introducing a filter to increase system reliability?...