The open delta and wye PT's will work since you are only looking at phase to phase voltages in the synchronizer. The synchronizer doesn't care how the voltages are developed. Vector A-B will always be in phase with vector A'-B', (A = the open-delta, A' = the wye PT) on either Y-Y or Open Delta PT’s.
The problem is that the bus side of the synch circuit has B phase grounded (open-delta connection) and the generator side grounds the wye point. There is 69 V between B & B’, A-A’, C-C’ even though all of the voltages are in phase.
What to do?
Chase the circuit to see if the phase voltages from the two sets of PT's get tied together anywhere, such as on a common for the synch light circuit or a jumper on the synch scope or a voltage relay looking at phase-to-ground voltage. Then make sure the synchronizer is looking for just phase voltages (A-B or A-C) and not phase to ground voltages. If that's the case, everything will work.
If there is a common ground or a cross connection some where the 69 V difference will blow fuses if you try to synch. Solution is to install two or three 120V:120V VT's to use as isolation transformers and put them on the feed to the synchronizer, preferably on the generator side to get rid of the wye connection. If you have to put them on the bus side, float the secondary and you will avoid the ground loop problems. Wire teh three VT's in wye/grounded-wye if requried.
I know it sounds strange, but I have done this on about 25 large generators (>250 MVA)and several small ones. I have had to use isolating transformers only twice.
To make sure everything works correctly before trying to synch the generator, see if you can lift the generator leads and close the breaker to backfeed power to the generator VT's. This puts the same voltage on both sets of PT’s. Then make sure the synchronizer and all meters show 12:00, in-phase, voltage match, correct rotation, etc.
You can also do this by opening the generator neutral connection, if you can’t get the generator VT’s energized without energizing the generator windings. The windings will be energized at 480 V but will have no current flow.
Good Luck.