Bartholomew69-
I feel your pain! You are probably sitting there having to 'splain to some manager (or worse - an MBA)why this vessel which has served reliably for 30 years needs additional repairs based on the discovery. This is now a large discovery job in the middle of a planned turnaround which may be critical path. Just keep in mind that just because it didn't fail doesn't mean that it is safe.
I concur with metengr that you need to discuss this with your AI, Jurisdiction, and insurance agency. Depending on the details of the problem (is it 90% penetration or 50%, no nozzle penetrations or other non-internal pressure loads on or near the seam, etc) you may be able to take a FFS approach using API-579 with this. You might have to derate the vessel to make it work, though.
One approach which might pacify your management is to figure out what your corrosion rate is and how much future corrosion allowance you need to get to the next opportunity to take this vessel out of service. Add some margin to the FCA to be safe (maybe 50%). Take UT's of the shell along the seam to be confident you know the existing thickness. Determine what your actual tmin is and see where you fall with regard to the FCA (see API-579 4.5) after reducing the available thickness by the lack of fusion percentage. This may put you into a situation where you can FFS the repair until the next scheduled outage so that it can be planned and prepared for (welders and weld rod on site, scaffolds erected, PWHT crew and equipment ready, etc.) It may even be possible to justify just replacing the vessel at the next outage if you can buy a new one with a long lead time.
A paper was published at the ASME Pressure Vessels and Piping Conference in 1994 by David Osage et. al. titled "Use of Nonlinear Analysis Techniques in Fitness-For-Service Assessments in the Refining Industry." This paper includes a case study where (during a plant outage) a two piece head with a seam which was "ostensibly joined by a double pass [groove] weld and subjected to a 100% RT... However, the inner pass was never welded, leaving a groove approximately 3/4 in. deep and 1 1/2 in. wide..." This is on a head with a tmin of 1.6 inches. Long story short, a quality FFS analysis was performed, the vessel placed back into service at the end of the outage, and a planned repair was done at the next outage. If you provide me your contact info (phone or email), I can get you a copy of this paper, since I couldn't find PVP-Vol 277 at the ASME site.
jt