I don't know the codes in MN, but it seems that using a grounding bushing is going to falter the reason why the CNC manufacturer wants an isolated ground, that is, an independent ground separate to the buildings common ground through its structure. When placed, levelled and secured, its likely your CNC's chassis will be making electrical contact somewhere to the buildings ground. If you route a dedicated isolated ground from ground rod/s through an EMT connector bodies ground bushing, you now have a parallel circuit (x2) of grounding conductors. Notwithstanding this, any existing "noise" that might be present on the buildings system ground will now also be figuratively "heard" at the CNC's CPU.
Regardless of all this, if your feeding AC to the CNC from the buildings existing service, then you are not installing a "service" to the CNC. Rather, it's just a branch circuit. Grounding bushings are only needed to ground the incoming metallic raceway AT THE SERVICE....not at branch circuits/feeders.