ok, no bathtub ...
you've got an upload with applies a direct shear and a monet to your bolts, the direct load is reacted in shear, and the monet as a couple (one bolt in tension).
basic question ... are you trying to show it good, or not ? it sounds like you're in some sort od dispute with the analyst.
how are you reacting the moment ? the most obvious way is a couple on the bolts. more reasonable (in an ultimate situation) would be to "heel-and-toe" about the furtherest corner (longer arm, smaller couple).
i'm still stuck on combining the preload with the applied tension ... are you sure the joint is not gapping at ultimate load ? if it is, then the preload has dissappeared and the load in the bolt is the applied load. if it hasn't, does the preload need to be that high ? maybe you could reduce the preload (check no gapping at limit load with minimum preload).