podum... again, CAUTION...
Conventional sheet metal dimensions, parts "fit-up" and assembly tooling will NOT [likely] work with parts [same configuration] fastened by adhesive bond methods. There are LOTS of issues to be considered that we have NOT discussed.
Also... the processes [and the environmental factors associated with them] and the the new configuration parts will likely required "full-blown" FAA approval [analytical and testing]. I think the FAA guys you said neede to be brought into the 21st Century "kicking and screaming" may really know what You don't know.
Suggestion: start "simpler". Try rivet-bonding methods first. In this process the configuration remains the same, EXCEPT the faying surfaces are filed with adhesive during assembly [thick film or paste with bond-line thickness control, 180F-to-250F MAX cure]. Obviously parts will have to have finishes designed for adhesive bonding [Phos acid anodize & adhesive-bond primers].
Assemble all parts using "clean" [not dirty] gloves, tables, drill-bits, tooling and fasteners. Deburring and proper fit-up up parts is essentail. Caution: parts MUST be clamped tightly together before fastening to isure tight joints [minimum gapping].
After fastening, "cook the assembly" [hot-cure the adhesive] in an air-circulating oven environment. NO bond-tooling is [usually] required... just racks for spacing the assembled parts to insure even heating and adhesive flow [with gravity and/or cappillary force].
After bonding, grind-off adhesive flash... touch-up any bare metal, prime and topcoat.
Advantages of rivet bonding.
a. Part looks, and is, essentially unchanged [for FAA certification purposes].
b. The adhesives fill-solid/hard all micro-gaps between parts. This improves vibration resistance and minimizes inter-fastener strain-deflection [buckling or flexing]. The part narural frequency(s) 1st, 2nd, 3rd etc.. orders] tend to increase as a result of the dampening affect of the adhesive [vibration an/or flight testing may be required to insure natural frequencies are still OK]. NOTE: sheet metal parts usually see dramatically higher dampening-of [resistance-to] "sonic vibrations" [very high frequency & high Db].
c. Usually, the corrosion durability of the of joints increases [CAUTION: YOU must insure adequate water-drainage holes/paths].
d. For general fatigue purposes, rivet bonding generally inproves thin sheet metal part lives from +25% to +250%... depending on base alloys/tempers of aluminum, quality of fastening methods [amaturis or very professions]... detail/assy fit-up and general configurations.
Regards, Wil Taylor