I would not want to be part of his learning process, and I would tell your client about your concerns. Typically SEs do not provide many dimensions or elevations, this is left up to the architect, civil engineer/survey, and the contractor to coordinate.
Is the top of the caisson going to extend above grade and serve as the column also? If not, and there will be a column and cap placed over top, then I wouldn't see a need be tied down to a specific elevation of the caisson...
Stick to your guns, he needs to field coordinate this, not you.