It doesn't sound like a problem for the pipeline. It will be below the ftost line.
What is the standard method of practice for road construction in the area? Do they replace the native soil in similar situations? What did you discover when you removed the existing soil, was it native, or borrowed fill?
Is the native soil compactable to 95% resulting in adequate bearing capacity? If so, why not use it? If it is not useable, discuss the situation with your client. Having to replace soil that was apparently adequately supporting the road pavement prior to your utility work could be cause for extra work payment. Presumably repairing an inadequate road infrastructure was not part of your utility construction work. Supposedly you would only be expected to repair or replace what was damaged during your utility installation at least to the level of fitness existing prior to your work. Are you expected to do actual road improvement too? Normal roadwork would tipically include 95% compaction under roadways, as that is the typical requirement for road subgrades, so you should provide the same. But it also means that was what was already existing there under the road before you began your work, if the road was built to customary standards. If it was not compacted to 95% before, than that IMO would be a road improvement. If the existing road subgrade was inadequate for a road, replacing it now with select fill would also be road improvement work. As for high moisture content, that is apparently not affecting use of the road. It is also something that existed prior to your arrival. Typically utility works that disturbs drainage is only required to reconstruct exactly what was disturbed to its prior condition. Its not a problem for the pipeline and supposedly was not a problem for the road before, so simple reconstruction to the existing condition should be enough. Road drainage improvements are beyond your scope. So all of those things could be items for which extra payment could be asked.
It leads me to believe that you can reuse all materials you encountered at the site. It sounds like all were suitable for their prior use with no reason to suspect that they suddenly become unusable, except for REcompaction needs, due to utility construction. If you disturbed some materials, like destroying any of the 95% level of compaction that was there, you could simply recompact that same material to 95%. Providing additional work and materials to bring a road up to customary standards is road improvement work and is most likely outside your utility construction contract.
The general rule is repair or replace anything changed, damaged or destroyed to the condition that existed before your arrival. Anything else is subject to extra payment, unless specific improvements are required by your contract. Does your contract address the issue?
Items required for your pipeline, such as special fill, are your responsibility. I think your pipeline does not need special fill. I think it does not need special drainage. Use existing native soil, if you can. Recompact existing materials only under the road or wherever you encountered it. Replace the damaged parts of the road surface. All to at least their condition prior to your arrival. Provide road crossing signs, if appropriate. Bury the pipe.
--Einstein gave the same test to students every year. When asked why he would do something like that, "Because the answers had changed."