Thanks for all the replies guys.
"The way that most people measure transmissivity, scatter ought not substantially affect that" What method would that be? As I understand it, measurement of diffuse transmission in the IR spectrum is fairly problematic and the error is significant.
I started with polycarbonates, specifically the Lexans which seem to be the best of the bunch, but unfortunately their transmittance drops off drastically past the near IR so 1200 nm+ They are good for the near IR though, and cheap. I'm not really concerned with the visible, only 3-5 micron.
I emailed the vendor about the COC. I'm hoping, but looking at the chemistry I'm suspicious about a dip in the transmittance around 4 microns due to the C-H. Their transmittance graph only goes to about 800nm unfortunately.
Actually... I've reread the experimental study and I'm not sure if I believe it anymore, first of all it's 53 years old, and second they attribute their peak to a vibrational mode of C-F at 4.2 microns = 2381 cm^-1 whereas I believe it should be around half of that. So I'm just going to try and see what kind of results I get with whatever samples I can drum up. If the scattering isn't too catastrophic maybe I can tune the camera to compensate as it should be constant across the spectrum - or at least the 2 micron range I'm interested in. Overall it's looking more like there isn't an obvious suitable candidate other than of course the crystals.
D