Depending on the specifics of your software, elemental contours may also be useful for controlling how and when output values are averaged. Results from elements of different thickness, material properties, etc. are typically NOT averaged.
I use MSC.Nastran for Windows (FEMAP + NASTRAN), which can use corner stresses instead of centroid stresses for elemental contours, giving essentially the same results as a nodal stress contour. Elemental contours have the added bonus of being able to control averaging. Typically, I allow averaging between elements, but not between elements with different properties, or between elements that intersect at angles greater than the default criterion (20 deg). This is especially useful when modeling with planar elements.
Whichever method you choose, the choices should be documented along with the results, because as you've already seen the results can vary widely due to the visualization method.
There are other considerations if you're concerned about the "redness" of your plot. Have you established that your results are converged by crunching at least 3 meshes of increasing density? How are your color levels being selected - automatically or by some material criterion?
NAFEMS (
has several excellent publications which address these issues.