For buried cross county petroleum pipelines, look up API 1102 (highway & railroad stresses on pipelines and their casings), and others. One of these others is for lowering existing pipelines. Others deal with horizontal directional drills. Pipeline Tool Box (google search) is a starting point. But, no single program, Triflex, Caesar II, AutoPipe, etc. has all the answers.
Before the battle, one must arm themselves with knowledge.