Referring to the post from "Strong" in the vibration forum.
Are the phase angles (both bearings on rotor)the same during normal vibration, indicating that "unbalance" remains the same.
During normal vibration, does the two bearings on shaft appear nearly in phase or nearly 180 out of phase. this indicates the vibration "mode" of the rotor. In phase indicates unbalance type causing high 1st critical, out of phase indicated unbalnce type causing high 2nd critical. If your rotor is operating near second critical with normal out of phase vibration, it would be sensitive to very small changes in center of rotation changes near the end of the rotor. ie a small umbalance weight at one end would cause high magnitude vibration. And would be very sensitive to vibration caused by a rubb at the end of the rotor.
During the periods of high vibration does the phase ange change with time and appear to be rotating.
If so, you problem are experancing a rub at that end of the rotor. (would be nice to know rotor casing geometery, since that to plays a significant part in determination). If the high vibration bearing is at the exhuasat end of the rotor with the larger raduis buckets (blades)
If rotor is operating greater than 2nd critical and since the rub is causing a vibration mode like 2nd critical (effecting on end more). The rub will usually clear it self with very little "machining" of the tight clearance, thus it may keep coming back. (also something to do about high spot of vibration not being in phase with point of contact) If the rotor is less than 2nd critical, the rub will usually continue to increase to a very large magnitude and "hammer" the tight clearance out.
The type of matereal that is causeing the rub will have an effect on whether it will self clear. Rubs in Brush or retractable packing are harder to clear than say solid spill strip. Rubs in hard deposit accumulation are also difficult to clear.
Coasting through critical with the high vibration may allow the magnitudes to greatly increase and clear the rub (high spot of vibration and point of contact come together), but you should verify with someone familiar with your unit that this will not do severe damage.
Is the CV operating cylinder near bearing and is it staying constant (however it's frequency of vibration is much lower)
Good luck and HAPPY NEW YEAR