What kind of damping values are you looking at? For lightly damped systems, say less than 10%, damping has a very small effect on the maximum shock response. In the Harris book as well as "Vibration Analysis for Electronic Equipment" by Dave Steinberg, the shock response spectra for a single DOF system with damping are plotted. For an undamped system, the peak amplification is 1.76. At 10% damping, the peak amplification ratio is right around 1.5. Going from 1% damping to 10% damping is a ten fold increase, but the peak shock response only decreases about 10%. This is different than the response to steady state vibration, where a ten fold increase in damping will have a similar effect on decreasing the response at resonance. In the isloation region, defined as the region of the spectra where the ratio of the system frequency to the pulse frequency is 0.5 or less, up to 10% damping, there is no difference in the response from the undamped model.
You should be able to find the shock response spectra for a half sine pulse for various damping ratios in shock and vibration literature. Just use these spectra to determine the response of your system.
Do you have access to FEA software? You can model a spring mass system and get the response to a half sine pulse.