You will be better of leaving the polycarb in the barrel and the temp set at 350 degrees F. I have used it in numerous medical jobs, and we would leave it for up to a week at a time. If the job you are using it for is highly visual, either clear or white, you can get black spec's. Purging will get rid of most of the polycarb, but you will always leave trace amounts behind. If you want to remove as much as possible, purging compounds such as Asaclean do a pretty good job, but are rather expensive. A cheaper option is to purge with cast acrylic. This is made from crushed acrylic sheets. This works well, but make sure you feed it slowly or it will bridge up in the feed throat worse than any other material I have ever seen.