AISC Design Guide #25 (newly published) is a good resource that you should probably check out for this situation. My take on your issue:
1) SA Buckling (and frame buckling): The Design Guide would have you use the full length of the member (with a K=1.0 assuming you are using the Direct Analysis Method). But, the calcualtion of the buckling load would be more complex since the properties vary along the length of the tapered member. Though if you have approximately uniform axial load, you can just assume an "equivalent" moment of inertia for buckling calcualtions.
One of the tricky things with tapered frames is that it should be easier for frame buckling to control over weak axis buckling. Therefore, the Direct Analysis Method becomes (IMHO) a more viable option than traditional hand calcs.
2) Beam Buckling (LTB): This should be calculated for each unbraced segment using the properties of the beam at the halfway point of the unbraced segment. This should be calculated separately for each flange which experiences compression. In your case, therefore, the 2.5 feet would be used when investigating top flange LTB buckling. The 9 feet would be used when investigation bottom flange LTB.
FWIW: I am not an expert in metal buildings or tapered frames. So, it's not like I speak from years of knowledge. My experience is relatively new as my company (RISA) is considering incorporating this design / code check procedure into our programs.