A current transformer (CT) will not make a good filter inductor. Most CT are designed using a core with moderately high permeability (u value). If the CT was intended for a frequency response to a few 10's of kHz, then the core is likely a ferrite - a very poor choice for low frequency where all the current is essentially magnetizing current, that is: low frequency AC current is equivalent to having a DC bias current and it takes very little to saturate a high u core.
Now, the core of a CT would be a good choice as a common mode choke, but the single high-turn winding of a CT is not suitable as the winding of a common mode choke.