Some things to consider in the intake system.
1. Shell noise from the expansion chamber
2. Inline Helmholtz effect of expansion chamber and dirty side duct (see Mann & Hummel paper SAE 2001-01-1431)
3. Duct lengths - these will amplify noise at resonances
4. Expansion lengths - these will not attenuate at resonances
5. Cost of system ? tooling / piece price ?
6. Flow rate of system - estimated at 0.4 m^3/min (this will be quite a pulsed flow (single cylinder) though so will be different to usual Automotive applications
7. Pressure loss of system - expansion / contraction losses
8. Radiated noise / orifice noise level needed?
9. Filtration efficiency ISO 5011 for details
Other things have been touched on here but this is new ground. My worry would be the inline Helmholtz effect (this amplifies the noise as it in-line rather than side branch) and getting it below the primary harmonic 0.5 order with only 3 litres. In your case this is extremely hard as this is 25 and 30 Hz depending on the rpm.
In your favour is that this will be a very low flow engine so the diameter of the ducting can be extremely small which will imit the radiated noise and help improve the expasion ratio effect of the expansion chamber.
For Automotive NVH, there is an excellent book which will answer a number of these questions by Matthew Harrison, he was my supervisor at Southampton ISVR.
Compressor noise and high frequency induction noise from turbos etc is not really covered in depth.
Also another good book for internal flow systems by D S Miller ISBN 0-947711-77-5, this is my 'bible' for pressure loss calcs and good air flow management.