Muthu,
I few of the things I've seen in situations similar to yours, a running unit taken down for repair then put back into service,
Faulty diodes, tested ok with DMM but under load failed, have seen this in CAT, KATO, EM and AVK tailends. I'm pretty hard about changing diodes and surge suppressors on repaired tail ends these days, the couple hundred bucks (US) for the parts sure makes it good insurance in my mind. But boy do a LOT of people not do it.
Over the years I have found three instances of connection problems with rotor pole jumpers after repair, one was a bad solder joint, one a bad wire crimp, and a loose bolted connection. All were very hard to find, resulted in AVR and diode failures until they were found. One of these was found doing a pole drop test (initial pole drop test performed at install was good), the other two putting the AVR in manual and watching the field, then doing a physical inspection when data indicated a problem with the rotor.
Numerous times have had the droop CT hooked up backwards, both primary and secondary on reinstall of tail end. Even in a couple cases it was not reconnected at all.
Numerous times bad field and PM connections, usually due to cage type terminal blocks and them being damaged by technicians with improper tools and/or procedures.
Once a small adjustable wrench left in the excitor stator housing (caused intermittant problems for two months), finally made a big enough problem to make a real mess and cause us to look under the cover again.
A few occurances of problems with the pole piece windings, both on new and repaired machines, usually due to nicking wires during wrapping, and problems not showing up for a while. There was a batch of KATO tailends sold to CAT for a project that all generators either failed or showed high vibration after 2-6 months, they said root cause was something to do with a tensioner on a wrapping machine nicking the wire. We swapped all the tail ends and no more problems that I am aware of at that site.
And in a few cases, just a bad repair process by the repair shop, usually everything looked ok initially, but problems cropped up soon after being in service, sometimes right at first close.
I miss field voltmeters in panels, on older sets they were common, and when the unit started and came up to speed you could see the relationship between the field output and the generator voltage. It was also nice to see what the field did right after sync, especially since DMM's and digital controls don't update very fast, and being able to see an analog meter gave you a great idea of what was happening. When I do startups or troubleshooting now I drag out the Simpson 260, not very high tech, but is helpful to me. I have talked a few customers into going back to field meters in their switchgear, mostly small island utilities where lightening strikes and tree branches are common, using the data from the field meter helps indicate if a tail end problem is brewing by a change in field output for a given load.
I can only think of once, in what I felt was a properly protected system, that the AVR was the root cause, it was an early CAT DVR and it went no field to full field after getting to about 1/2 load, it did it so fast that all the operator saw was a jiggle in the amp meter. But the unit had multiple diode failures, then a rotor failure, then I got called in to look at it, when we got it back on line with a repaired rotor and new diodes it was fine, came up on load, operator noted that the "jiggle" was back, had a meter hooked up to the field and took a look, saw the on-off. We replaced the AVR, jiggle went away, and I never went back. It was happening so fast that the 40 protection didn't catch it, the overall system appeared to buffer the transient so it was hard to notice. Even had the tech who had made the previous repairs with me, he said he had looked at the field, he had an older DMM, so we compared my analog meter to his digital, found we saw the analog meter deflect and the DMM only showed a minor change.
Well, hope it helps, and good luck. Remember if it was easy someone would have already fixed it!
Mike L.