If you simply multiply the G load times the mass in order to try and determine the equivalent static load you are ignoring dynamics. The shock amplification factor is a function of the ratio of the natural frequencies of the structure to the frequency of the shock pulse. You need to multiply your G load times the amplification factor times your mass -> F= Amp_Factor*G_load*mass
Now for the tough part, how do you determine the amplification factor. Well if you can approximate your system as a 1DOF, or 2DOF system, the response of these types of systems can be found in any text on vibrations. In fact you can find them online. There will be plots of amplification factor vs frequency ratio. If you know the frequency ratio you can determine the amplification factor. For instance, assume your structure has a fundamental frequency of 250 Hz and lets say the pule duration is .0085. This translates into 60Hz. Yor frequency ratio is 1.667. From the response plot, the amplification factor is going to be (assuming 5% structural damping) ~1.55. So if your shock input is 40 G's, you would actually multiply 62 G's by the mass of the structure.
However if you have closely spaced modes then there will be dynamic coupling and the amplification can be much, much higer.
If you have access to FEA software you can easily model these things. Bottom line: Unless the natural frequency is on the order of 10X higher than the frequency of the pulse, you need to have some amplification factor.