The way I've usually seen it done, and a method thats taught in some apprenticeship programs, for the common bolt patterns that are divisible by 4, is as follows.
Take the number of bolts and divide by 4.
Consider this your 'max' number.
Start at the 12 o'clock position and number this bolt '1'.
Going clockwise, mark each bolt as the prior bolt's #, plus 4.
If the number you're about to write is greater than your max number, mark it '3', and continue the pattern by adding 4 to get the next bolt number.
The next time you reach your max number, mark that bolt '2', continue again, and then when you max out again, that bolt is '4'.
Then you just tighten in sequence, in as many passes as called for. It's basically the same idea as above, but you're numbering the bolts via tightening sequence rather than position, and it's simple enough you can remember how to do it in the field.
Continue marking bolts until you reach #1.