Yes. You need to isolate the two. I did a failure investigation on similar a few years back. Corrosion occurred at connections within about 3 years. Perforated the aluminum. Will see if I still have photos.
Project was in Florida panhandle. Where are you located in Florida?
Even separating the aluminum panels from steel deck is not the only thing you'll need to do. The attachment clips must have the correct fasteners. In the case I did, the roofer used epoxy coated fasteners....good idea and recommended by manufacturer; however, no one took into account that the fasteners, because of the clip design, would rub against the aluminum panels. Due to differences in thermal expansion and the insulation between the aluminum and steel, there was a fair amount of differential movement. This eventually wore the coating down so that there was contact. Further, if they breach the coating during fastener installation, the same thing happens...contact.
You will need stainless steel fasteners and I would suggest an additional separator of rubber or other membrane between them as well.