That depends upon what your objective is.
By focusing upon the duration that the intake valve is closed, it's evident that your objective in this case is to have a positive reflection happening at the intake valve during the subsequent valve-overlap period.
That's well and good if your engine has a narrow operating RPM range. (Or, perhaps, if your engine has fully variable runner lengths and thus can adjust itself to conditions.) Otherwise, it will be found that you can plug in a lower or higher engine RPM that corresponds to the next higher or lower harmonic (respectively) so as to obtain the same tuned length. Now, what happens at an RPM that is in between those points? Simple; you no longer have a positive reflection happening during valve overlap, you have a negative one. This phenomenon helps at some RPM points but hinders at others - peaks and valleys through the RPM operating range that average out to nil unless you are always at an almost-constant RPM corresponding to a peak and never deviate far enough to reach the adjacent valley.
In my roadracing application (DOHC 4-valve engine with a single individual throttle per cylinder), I of course want top end power (target 12,000 rpm in my case) but I also want torque from around 8000 rpm coming out of a corner, and for following the 1st-to-2nd shift so as to hopefully not get beaten to turn one, and for it to not bog down too badly if traffic conditions (or a missed downshift!) happen to get it a little lower than that. This is a wide enough operating range that no matter what harmonics you choose, it will always be sometimes in favour and sometimes against. If it's going to be like that then it's not worth pursuing, as long as the effect isn't too extreme.
Through engine simulations and thus far backed up by practical reality, I have found it better to focus upon the intake ramming effect at the end of the intake stroke, and not concern myself with the minor positive and negative effects during overlap from the valve-closed reflections. Roughly speaking it seems that one wants the wave to travel out from the intake valve to the airbox and back to the valve in about 90 degrees at the peak-power RPM. The next trip out to the airbox is an expansion wave that accelerates the airflow further, and takes longer because it's against the already-established direction of flow. Then that gets reflected back at the airbox into the runner as another positive reflection further increasing flow velocity, and this takes less time because it's travelling with the already-established direction of flow. At around this time the piston is nearing the bottom of its stroke but you now have a column of air moving towards the cylinder at a good part of the speed of sound which hasn't gotten the message yet that the piston has stopped.
Of course the valve overlap period has the job of getting this process started. The job of pulling the cylinder down to a healthy partial vacuum that dominates over anything the reflections in the intake runner will do, is that of the exhaust system.