One way to fine tune your result is to make a movable back short position for tuning. I thought 1/4 wave electrical distance is standard, but it's probably slightly off this.
I'm not used to seeing a large diam. stub, usually 3 tuning screws on the bottom, although some have none.
If I were making this, I'd get the waveguide, make a tunable short in the back, buy a type N-f to N-f bulkhead adapter. Stick it in the waveguide with a probe pin attached to the inside N-f, and add a copper or silver metal tape triangle to the probe and shape that. For a more permanent pin, you could use either a thin copper clad circuit card (FR4) or shim stock and solder it onto the probe. It might be better to have a real probe machined though.
Seal the probe in the N-f. Then maybe add tuning screws for fine tune on the bottom under the probe to tweak the final assy. You could add a large tuning screw to that formerly movable back wall too for a little extra control.
This all depends on power requirements of course.
If you're going to make alot of these, hire a consultant to fine tune your design and avoid tuning screws.
We use Jim Reed at optimal designs in Austin Texas to fine tune your design on CST and skip all the tuning screws and movable walls. Probably cost $5K ish. We use Jim alot, good Engineer and I wish he'd start paying me for recommending him.
kch