We're talking about the diaphragm loading generated by RISAFloor that come into RISA-3D. Correct?
There just isn't a good work around for this. In cases like this, the wind load are best entered manually. I know this is a large percentage of low rise buildings. But, keep in mind that the wind loading concepts in RISAFloor were originally developed around the concept of mid-rise buildings where you have a common floor plan repeated for 5 or 10 stories.
My guess is that similar issues exist with RAM and ETABs. But, it would be good to know if anyone has run into this issue with them. If those programs have come up with ways to deal with this issue, then the quickest way to get the attention of the higher ups at RISA is usually to point out to them that their competitors do a better job at this.
Note:
One thing that makes this so difficult in RISAFloor is that the program knows Floors and elevations. It knows the extents of the diaphragm at each level. But, it doesn't know about the "skin" or "shell" of the building. I suppose the program could (or should) figure it out if there were exterior walls around the building. But, what about non-structural cladding supported by steel or such? That never shows up in the RISAFloor model, making it difficult for the program to know enough to get a good wind load.
Now, rather than provide a "perfect" solution for these cases, it may be easier for the program to provide a user 'bypass' of the wind load calc. And, just give users control over the numbers that go to each diaphragm. This would be a lot easier to program. I would think and it would be an effective work around for most cases.