An amateur replies: I've been messing about with Microtunnel (google to find it) for sails. I don't think you've really got a separation bubble on the windward side, I think you have a stagnated, or even backwinded, area (sorry, don't know the proper term for this). This is actually good, in that velocities are low so pressures are high. Low velocities in the windward side of the sail towards the front help push you along. It is also unlikely, but possible, that you have separation just behind the mast on the leeward side. You camber inducers should fill out that part of the shape nicely to prevent that, or else your sail should rotate around the mast to do so in a simple sail, so that your wing profile resembles a comma.
Roughening the surface of the wing in the nose area helps prevent separation further back at high AoA, I don't think (I'm guessing) it really has much effect where you still have laminar flow.
Cheers
Greg Locock