When the shafts become misaligned, e.g. while deflecting under load, that general area will be particularly stressed, and relatively likely to fail in fatigue, throwing a chip that will eventually find its way into the mesh and destroy the gears. Better to remove it preemptively.
Still better; cut a small chamfer over the entire end profile, which is laborious and expensive when done by hand, but I think some machinery exists for the purpose.
NOT better; abrasive flap wheels and related items. The random scratches from the abrasive grains don't help fatigue life.
Mike Halloran
Pembroke Pines, FL, USA