I can't help you with a specific procedure, but I would advise caution before jumping into something like this. If the tanks have been built and hyrotested, it might be better to leave them as is than to repair them. You could spend a lot of time and money with no real improvement in safety.
If you take a new "perfect" tank, and start cutting out seams and rewelding them, or removing plates and rewelding them, you'll induce a lot more distortion than was done in the initial building of the tank. When the tank is being built, and you weld one seam, other edges of that plate are free to move somewhat, but not so when it's all welded out. This makes it difficult to improve a tank by additional work.
One of the common ways to round up a tank is to weld stiffeners in it. But the API-650 interpretation of Nov. 9, 1994 prohibits this as a means of achieving tolerances.
If I remember correctly, API-653 allows higher tolerances for tanks that have been cut down and re-erected, and you might want to consider applying these tolerances.