All very good points - if the aggregate changes, there needs to be a new concrete mix design approved by the EOR. The question, I think, is of one of compatability of the two mixes of concrete - especially at the interface of the wall and the slab. This is probably handled by the inclusion of waterstops between the slab and the wall - something that one would do in any event even with the same mix.
Each concrete mix would have its own characteristics. We do not know, from the original post, what the difference of aggregate is - other than it is likely from a different source. The gradation (say nominal or maximum aggregate size) difference between the two is not known. One would presume that each of the aggregates has a history locally of being used successfully in concrete. So, unless the source is a new one with no history, one would presume that considerations of alkali reaction or other detrimental effects would not be of concern.
In a concrete tank one would presume that permeability would be of an utmost concern. You would want a "tighter" mix for a concrete tank holding liquid. This would be a matter to consider in approving the concrete mix design. If the wall has been poured with an unapproved mix design, then I would say you have certain problems (potential) that must be addressed by the design and construction players - both from a technical and contractual point of view.