Use the lowest Tmin, period. Think about adding repair plates to any really low areas, to bring your Tmin up to a better level.
May need to reread API-653: the tank only needs 0.10" calculated remaining thickness at double your Inspx interval [makes your half-life Inspx happen at 20-years]. 2 * 20-years = 40 years to have a Tmin of 0.10"
And if this tank has full containment [well-made dike] and leak detection [sits on full concrete pad, or had double-floor, etc] the Tmin for floors is only 0.05".